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This article lists the Linux packages required for running or building Microsoft R packages on Linux and Hadoop platforms.
For computers with an internet connection, setup downloads and adds any missing dependencies automatically. But, if your system is not internet-connected or not configured to use a package manager, a separate download followed by manual install of dependent packages is required.
You can download files from your Linux or Hadoop vendor.
You can use this syntax to download specific packages:
yum install --downloadonly --downloaddir=/tmp/<download-here> <package-name>
Alternatively, for offline installations, you can download packages over an internet connection, upload to an internet-restricted Linux machine, and then use rpm -i <package-name> to install the package.
For a list of supported operating systems and versions, see Supported platforms.
Package dependencies for Microsoft R Server 9.1.0
Applies to: CentOS, RedHat Enterprise Linux (RHEL), SUSE SLES (1)
| Package | Version | Repository |
|---|---|---|
cairo |
1.8.8-6.el6_6 | base |
fontconfig |
2.8.0-5.el6 | base |
freetype |
2.3.11-17.el6 | base |
libICE |
1.0.6-1.el6 | base |
libSM |
1.2.1-2.el6 | base |
libX11 |
1.6.3-2.el6 | base |
libX11-common |
1.6.3-2.el6 | base |
libXau |
1.0.6-4.el6 | base |
libXft |
2.3.2-1.el6 | base |
libXrender |
0.9.8-2.1.el6_8.1 | updates |
libXt |
1.1.4-6.1.el6 | base |
libgomp |
4.4.7-17.el6 | base |
libpng |
2:1.2.49-2.el6_7 | base |
libthai |
0.1.12-3.el6 | base |
libxcb |
1.11-2.el6 | base |
pango |
1.28.1-11.el6 | base |
pixman |
0.32.8-1.el6 | base |
1 If you are performing a manual or offline parcel installation using on Cloudera on SUSE SLES, the SUSE dependencies are as follows: cairo, fontconfig, freetype, xorg-x11-libICE, xorg-x11-libSM, xorg-x11-libX11, xorg-x11-libXau, libXft, xorg-x11-libXrender, xorg-x11-libXt, libgomp43, libpng12-0, libthai, xorg-x11-libxcb pango
Applies to: Ubuntu
The following Debian packages are required for running R Server on Ubuntu.
libXtlibSM6libpango1.0-0libgomp1curl
Package dependencies for Microsoft R Server 9.0.1
| Package | Architecture | Version | Repository | Size |
|---|---|---|---|---|
| cairo | x86_64 | 1.8.8-6.el6_6 | base | 309 k |
| fontconfig | x86_64 | 2.8.0-5.el6 | base | 186 k |
| freetype | x86_64 | 2.3.11-17.el6 | base | 361 k |
| libICE | x86_64 | 1.0.6-1.el6 | base | 53 k |
| libSM | x86_64 | 1.2.1-2.el6 | base | 37 k |
| libX11 | x86_64 | 1.6.3-2.el6 | base | 586 k |
| libX11-common | not applicable | 1.6.3-2.el6 | base | 169 k |
| libXau | x86_64 | 1.0.6-4.el6 | base | 24 k |
| libXft | x86_64 | 2.3.2-1.el6 | base | 55 k |
| libXrender | x86_64 | 0.9.8-2.1.el6_8.1 | updates | 24 k |
| libXt | x86_64 | 1.1.4-6.1.el6 | base | 165 k |
| libgomp | x86_64 | 4.4.7-17.el6 | base | 134 k |
| libpng | x86_64 | 2:1.2.49-2.el6_7 | base | 182 k |
| libthai | x86_64 | 0.1.12-3.el6 | base | 183 k |
| libxcb | x86_64 | 1.11-2.el6 | base | 142 k |
| pango | x86_64 | 1.28.1-11.el6 | base | 351 k |
| pixman | x86_64 | 0.32.8-1.el6 | base | 243 k |
Package dependencies for Microsoft R Server 8.0.5
In release 8.0.5, the installer was revised. Most package dependencies are included in the version of Microsoft R Open that installs with R Server, accounting for the much smaller list of dependencies.
The following list of 18 packages are Linux packages that yum looks for during an R Server installation.
| Package | Architecture | Version | Repository | Size |
|---|---|---|---|---|
| cairo | x86_64 | 1.8.8-6.el6_6 | base | 309 k |
| fontconfig | x86_64 | 2.8.0-5.el6 | base | 186 k |
| freetype | x86_64 | 2.3.11-17.el6 | base | 361 k |
| libICE | x86_64 | 1.0.6-1.el6 | base | 53 k |
| libSM | x86_64 | 1.2.1-2.el6 | base | 37 k |
| libX11 | x86_64 | 1.6.3-2.el6 | base | 586 k |
| libX11-common | not applicable | 1.6.3-2.el6 | base | 169 k |
| libXau | x86_64 | 1.0.6-4.el6 | base | 24 k |
| libXft | x86_64 | 2.3.2-1.el6 | base | 55 k |
| libXrender | x86_64 | 0.9.8-2.1.el6_8.1 | updates | 24 k |
| libXt | x86_64 | 1.1.4-6.1.el6 | base | 165 k |
| libgomp | x86_64 | 4.4.7-17.el6 | base | 134 k |
| libpng | x86_64 | 2:1.2.49-2.el6_7 | base | 182 k |
| libthai | x86_64 | 0.1.12-3.el6 | base | 183 k |
| libxcb | x86_64 | 1.11-2.el6 | base | 142 k |
| pango | x86_64 | 1.28.1-11.el6 | base | 351 k |
| pixman | x86_64 | 0.32.8-1.el6 | base | 243 k |
Package dependencies for Microsoft R Server 8.0.0
Most of the packages listed in Table 1 (for RHEL systems) and Table 2 (for SLES 11 systems), are explicitly required by Microsoft R Server, either to build R itself or as a prerequisite for an additional Microsoft package. Table 3 and Table 4 are downstream dependencies (dependencies of packages listed in Table 1 or Table 2), for RHEL systems and Table 4 for SLES 11 systems, respectively. These packages are automatically installed while the automated script is running. Dependency lists are based on default installs of RHEL 6 and SLES11; if your system has a minimal installation of the operating system, additional packages may be required.
Table 1. Packages Explicitly Required by Microsoft R Server on RHEL Systems
bzip2-devel
cairo-devel
ed
gcc-objc
gcc-c++
gcc-gfortran
ghostscript-fonts
libicu
libicu-devel
libgfortran
libjpeg\*-devel \
libSM-devel
libtiff-devel
libXmu-devel
make
ncurses-devel
pango
pango-devel
perl
readline-devel
texinfo
tk-devel
Table 2. Packages Explicitly Required by Microsoft R Server on SLES 11 Systems
cairo-devel
ed
gcc-c++
gcc-fortran
gcc-objc
ghostscript-fonts-std
libgfortran43
libjpeg-devel
libpng-devel
libtiff-devel
make
ncurses-devel
pango-devel
perl
readline-devel
texinfo
tk-devel
xorg-x11-libSM-devel
xorg-x11-libXmu-devel
Table 3. Secondary Dependencies Installed for Microsoft R Server on RHEL Systems
cloog-ppl
cpp
font-config-devel
freetype
freetype-devel
gcc
glib2-devel
libICE-devel
libobjc
libpng-devel
libstdc++-devel
libX11-devel
libXau-devel
libxcb-devel
libXext-devel
libXft-devel
libXmu
libXrender-devel
libXt-develmpfr
pixman-devel
ppl glibc-headers
tcl gmp
tcl-devel kernel-headers
tk
xorg-x11-proto-devel
zlib-devel
Table 4. Secondary Dependencies Installed for Microsoft R Server on SLES 11 Systems
cpp43
fontconfig-devel
freetype2-devel
gcc
gcc43 libX11
gcc43-c++
gcc43-fortran
gcc43-objc
glib2-devel
glibc-devel
libobjc43 tcl
libpciaccess0
libpciaccess0-devel
libpixman-1-0-devel
libstdc++-devel
libstdc++43-devel
libuuid-devel gmp
linux-kernel-headers
pkg-config
tack
tcl-devel
xorg-x11-devel
xorg-x11-fonts-devel
org-x11-libICE-devel
xorg-x11-libX11-devel
xorg-x11-libXau-devel
xorg-x11-libXdmcp-devel
xorg-x11-libXext-devel
xorg-x11-libXfixes-devel
xorg-x11-libXp-devel
xorg-x11-libXpm-devel
xorg-x11-libXprintUtil-devel
xorg-x11-libXrender-devel
xorg-x11-libXt-devel
xorg-x11-libXv-devel
xorg-x11-libfontenc-devel
xorg-x11-libxcb-devel
xorg-x11-libxkbfile-devel
xorg-x11-proto-devel
xorg-x11-util-devel
xorg-x11-xtrans-devel
zlib-devel